BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021C12LP1|AL427743
(977 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 1836 0.0
>3x_Contig1758
Length = 25930
Score = 1836 bits (920), Expect = 0.0
Identities = 963/978 (98%), Gaps = 3/978 (0%)
Strand = Plus / Plus
Query: 1 gatccaactagagaaccaagataagactgagtattgattagccttcttttccctttcctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7613 gatccaactagagaaccaagataagactgagtattgattagccttcttttccctttcctt 7672
Query: 61 ttccatggcagaattgatggcagtaaccaaawamwctcwtcttgccaatatattcaattg 120
||||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||||
Sbjct: 7673 ttccatggcagaattgatggcagtatccaaatactctcttcttgccaatatattcaattg 7732
Query: 121 caatcgggttaaaagcatcaataatgatgtggtataggacaagataatgatcttggtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7733 caatcgggttaaaagcatcaataatgatgtggtataggacaagataatgatcttggtgat 7792
Query: 181 agctttgagtttcaaatcgtcccaaagctcggccttggatttcgtagacgtttcagaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7793 agctttgagtttcaaatcgtcccaaagctcggccttggatttcgtagacgtttcagaaac 7852
Query: 241 gctagtagatatctrcagattgcggagatttcgctgacacactgggtgcaggcgtcatcg 300
|||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7853 gctagtgg-tatctgcagattgcggagatttcgctgacacactgggtgcaggcgtcatcg 7911
Query: 301 cactcattcctgaacttaagccctcattttccaactcattcccagctatttcacctttgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7912 cactcattcctgaacttaagccctcattttccaactcattcccagctatttcacctttgg 7971
Query: 361 aaagcttcttctgtaactttttcccctttagagcctctacaatagaatcaagatcgaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7972 aaagcttcttctgtaactttttcccctttagagcctctacaatagaatcaagatcgaaat 8031
Query: 421 ccttagccaacactaacgtcattaccggcatcaattcataaagagtgtacaacgagtcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8032 ccttagccaacactaacgtcattaccggcatcaattcataaagagtgtacaacgagtcct 8091
Query: 481 gctgagtttgtacaaacctccgtttgatctgttccttgacaaatcgttgctccgtcattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8092 gctgagtttgtacaaacctccgtttgatctgttccttgacaaatcgttgctccgtcattt 8151
Query: 541 tcaaatgctgcttgtacaaccatcttttactgaaatagaccgtaatagcgcatgtagcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8152 tcaaatgctgcttgtacaaccatcttttactgaaatagaccgtaatagcgcatgtagcaa 8211
Query: 601 atagcgta-saaacaaaacactagaaacaacgaacttctttctgtgtctctgaaccagag 659
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8212 atagcgtagcaaacaaaacactagaaacaacgaacttctttctgtgtctctgaaccagag 8271
Query: 660 atcgattcccagtcatgatgaggggtaaaadyataacttataacttagagcaatgtaatt 719
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 8272 atcgattcccagtcatgatgaggggtaaaaaaataacttataacttagagcaatgtaatt 8331
Query: 720 cttctattgattttccactacagccgttgtcagattgcgtgtagagctttcctagtgtcg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8332 cttctattgattttccactacagccgttgtcagattgcgtgtagagctttcctagtgtcg 8391
Query: 780 ttgtgtgtcttgatactttattgatgttgatgtrtacttgctagttagttattttaatgt 839
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8392 ttgtttgtcttgatactttattgatgttgatgtttacttgctagttagttattttaatgt 8451
Query: 840 ttttcgaattttgtttccccctcaaagagcgacaaattcgacagatttaagagaaaacat 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8452 ttttcgaattttgtttccccctcaaagagcgacaaattcgacagatttaagagaaaacat 8511
Query: 900 ataccaaagagatagaattgcgttgggtattgaacctctatggttctgcaactggtgcc- 958
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8512 ataccaaagagatagaattgcgttgggtattgaacctctatggttctgcaactggtgcca 8571
Query: 959 acagatattttatagtgt 976
||||||||||||||||||
Sbjct: 8572 acagatattttatagtgt 8589
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6827
Number of Sequences: 1807
Number of extensions: 6827
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 977
length of database: 10,358,551
effective HSP length: 16
effective length of query: 961
effective length of database: 10,329,639
effective search space: 9926783079
effective search space used: 9926783079
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)